Extended example to use logistic regression code

This commit is contained in:
Alejandro Saucedo 2020-10-04 16:22:19 +01:00
parent 7715db8993
commit a04dabc22c
5 changed files with 234 additions and 40 deletions

View file

@ -5,7 +5,8 @@ add_subdirectory(../../../../../../../ ${CMAKE_CURRENT_BINARY_DIR}/kompute_build
set(VK_ANDROID_INCLUDE_DIR ${ANDROID_NDK}/sources/third_party/vulkan/src/include)
add_library(kompute-jni SHARED
KomputeJniNative.cpp)
KomputeJniNative.cpp
KomputeModelML.cpp)
include_directories(
${VK_ANDROID_COMMON_DIR}
@ -18,7 +19,9 @@ set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++14 \
-DKOMPUTE_DISABLE_VK_DEBUG_LAYERS=1")
target_link_libraries(kompute-jni
# Libraries from kompute build
kompute
log
kompute_vk_ndk_wrapper
# Libraries from android build
log
android)

View file

@ -16,10 +16,6 @@
#define RELEASE 1
#include <android/log.h>
//#include <android_native_app_glue.h>
//#include <cassert>
//#include <memory>
//#include <vector>
#include <unistd.h>
#include <string.h>
@ -27,19 +23,12 @@
#include "kompute/Kompute.hpp"
#include "KomputeModelML.hpp"
#ifndef KOMPUTE_VK_INIT_RETRIES
#define KOMPUTE_VK_INIT_RETRIES 5
#endif
// Android log function wrappers
static const char* kTAG = "KomputeJni";
#define LOGI(...) \
((void)__android_log_print(ANDROID_LOG_INFO, kTAG, __VA_ARGS__))
#define LOGW(...) \
((void)__android_log_print(ANDROID_LOG_WARN, kTAG, __VA_ARGS__))
#define LOGE(...) \
((void)__android_log_print(ANDROID_LOG_ERROR, kTAG, __VA_ARGS__))
static std::vector<float> jfloatArrayToVector(JNIEnv *env, const jfloatArray & fromArray) {
float *inCArray = env->GetFloatArrayElements(fromArray, NULL);
if (NULL == inCArray) return std::vector<float>();
@ -61,12 +50,12 @@ extern "C" {
JNIEXPORT jboolean JNICALL
Java_com_ethicalml_kompute_KomputeJni_initVulkan(JNIEnv *env, jobject thiz) {
LOGI("Initialising vulkan");
SPDLOG_INFO("Initialising vulkan");
uint32_t totalRetries = 0;
while (totalRetries < KOMPUTE_VK_INIT_RETRIES) {
LOGI("VULKAN LOAD TRY NUMBER: %u", totalRetries);
SPDLOG_INFO("VULKAN LOAD TRY NUMBER: %u", totalRetries);
if(InitVulkan()) {
break;
}
@ -86,31 +75,17 @@ Java_com_ethicalml_kompute_KomputeJni_kompute(
jfloatArray xjJFloatArr,
jfloatArray yJFloatArr) {
LOGI("Creating manager");
SPDLOG_INFO("Creating manager");
std::vector<float> xiVector = jfloatArrayToVector(env, xiJFloatArr);
std::vector<float> xjVector = jfloatArrayToVector(env, xjJFloatArr);
std::vector<float> yVector = jfloatArrayToVector(env, yJFloatArr);
kp::Manager mgr;
KomputeModelML kml;
kml.train(yVector, xiVector, xjVector);
auto tensorA = mgr.buildTensor(xiVector);
auto tensorB = mgr.buildTensor(xjVector);
auto tensorC = mgr.buildTensor(yVector);
std::vector<float> pred = kml.predict(xiVector, xjVector);
LOGI("Result before:");
for(const float & i : tensorC->data()) {
LOGI("%f ", i);
}
mgr.evalOpDefault<kp::OpMult<>>({tensorA, tensorB, tensorC});
mgr.evalOpDefault<kp::OpTensorSyncLocal>({tensorC});
LOGI("Result after:");
for(const float & i : tensorC->data()) {
LOGI("%f ", i);
}
return vectorToJFloatArray(env, tensorC->data());
return vectorToJFloatArray(env, pred);
}
}

View file

@ -0,0 +1,131 @@
#include "KomputeModelML.hpp"
KomputeModelML::KomputeModelML() {
}
KomputeModelML::~KomputeModelML() {
}
void KomputeModelML::train(std::vector<float> yData, std::vector<float> xIData, std::vector<float> xJData) {
std::vector<float> zerosData;
for (size_t i = 0; i < yData.size(); i++) {
zerosData.push_back(0);
}
uint32_t ITERATIONS = 100;
float learningRate = 0.1;
std::shared_ptr<kp::Tensor> xI{ new kp::Tensor(xIData) };
std::shared_ptr<kp::Tensor> xJ{ new kp::Tensor(xJData) };
std::shared_ptr<kp::Tensor> y{ new kp::Tensor(yData) };
std::shared_ptr<kp::Tensor> wIn{ new kp::Tensor({ 0.001, 0.001 }) };
std::shared_ptr<kp::Tensor> wOutI{ new kp::Tensor(zerosData) };
std::shared_ptr<kp::Tensor> wOutJ{ new kp::Tensor(zerosData) };
std::shared_ptr<kp::Tensor> bIn{ new kp::Tensor({ 0 }) };
std::shared_ptr<kp::Tensor> bOut{ new kp::Tensor(zerosData) };
std::shared_ptr<kp::Tensor> lOut{ new kp::Tensor(zerosData) };
std::vector<std::shared_ptr<kp::Tensor>> params = { xI, xJ, y,
wIn, wOutI, wOutJ,
bIn, bOut, lOut };
{
kp::Manager mgr;
if (std::shared_ptr<kp::Sequence> sq =
mgr.getOrCreateManagedSequence("createTensors").lock()) {
sq->begin();
sq->record<kp::OpTensorCreate>(params);
sq->end();
sq->eval();
// Record op algo base
sq->begin();
sq->record<kp::OpTensorSyncDevice>({ wIn, bIn });
#ifdef KOMPUTE_ANDROID_SHADER_FROM_STRING
// Newer versions of Android are able to use shaderc to read raw string
sq->record<kp::OpAlgoBase<>>(
params, std::vector<char>(LR_SHADER.begin(), LR_SHADER.end()));
#else
// Older versions of Android require the SPIRV binary directly
sq->record<kp::OpAlgoBase<>>(
params, std::vector<char>(
kp::shader_data::shaders_glsl_logisticregression_comp_spv,
kp::shader_data::shaders_glsl_logisticregression_comp_spv
+ kp::shader_data::shaders_glsl_logisticregression_comp_spv_len
));
#endif
sq->record<kp::OpTensorSyncLocal>({ wOutI, wOutJ, bOut, lOut });
sq->end();
// Iterate across all expected iterations
for (size_t i = 0; i < ITERATIONS; i++) {
sq->eval();
for (size_t j = 0; j < bOut->size(); j++) {
wIn->data()[0] -= learningRate * wOutI->data()[j];
wIn->data()[1] -= learningRate * wOutJ->data()[j];
bIn->data()[0] -= learningRate * bOut->data()[j];
}
}
}
}
this->mWeights = kp::Tensor(wIn->data());
this->mBias = kp::Tensor(bIn->data());
}
std::vector<float> KomputeModelML::predict(std::vector<float> xI, std::vector<float> xJ) {
assert(xI.size() == xJ.size());
std::vector<float> retVector;
// We run the inference in the CPU for simplicity
// BUt you can also implement the inference on GPU
// GPU implementation would speed up minibatching
for (size_t i = 0; i < xI.size(); i++) {
float xIVal = xI[i];
float xJVal = xJ[i];
float result = (xIVal * this->mWeights.data()[0]
+ xJVal * this->mWeights.data()[1]
+ this->mBias.data()[0]);
// Instead of using sigmoid we'll just return full numbers
float var = result > 0 ? 1 : 0;
retVector.push_back(var);
}
return retVector;
}
std::vector<float> KomputeModelML::get_params() {
std::vector<float> retVector;
if(this->mWeights.size() + this->mBias.size() == 0) {
return retVector;
}
retVector.push_back(this->mWeights.data()[0]);
retVector.push_back(this->mWeights.data()[1]);
retVector.push_back(this->mBias.data()[0]);
retVector.push_back(99.0);
return retVector;
}

View file

@ -0,0 +1,85 @@
#ifndef KOMPUTEMODELML_HPP
#define KOMPUTEMODELML_HPP
#include <vector>
#include <string>
#include "kompute/Kompute.hpp"
class KomputeModelML {
public:
KomputeModelML();
virtual ~KomputeModelML();
void train(std::vector<float> yData, std::vector<float> xIData, std::vector<float> xJData);
std::vector<float> predict(std::vector<float> xI, std::vector<float> xJ);
std::vector<float> get_params();
private:
kp::Tensor mWeights;
kp::Tensor mBias;
};
static std::string LR_SHADER = R"(
#version 450
layout (constant_id = 0) const uint M = 0;
layout (local_size_x = 1) in;
layout(set = 0, binding = 0) buffer bxi { float xi[]; };
layout(set = 0, binding = 1) buffer bxj { float xj[]; };
layout(set = 0, binding = 2) buffer by { float y[]; };
layout(set = 0, binding = 3) buffer bwin { float win[]; };
layout(set = 0, binding = 4) buffer bwouti { float wouti[]; };
layout(set = 0, binding = 5) buffer bwoutj { float woutj[]; };
layout(set = 0, binding = 6) buffer bbin { float bin[]; };
layout(set = 0, binding = 7) buffer bbout { float bout[]; };
layout(set = 0, binding = 8) buffer blout { float lout[]; };
float m = float(M);
float sigmoid(float z) {
return 1.0 / (1.0 + exp(-z));
}
float inference(vec2 x, vec2 w, float b) {
// Compute the linear mapping function
float z = dot(w, x) + b;
// Calculate the y-hat with sigmoid
float yHat = sigmoid(z);
return yHat;
}
float calculateLoss(float yHat, float y) {
return -(y * log(yHat) + (1.0 - y) * log(1.0 - yHat));
}
void main() {
uint idx = gl_GlobalInvocationID.x;
vec2 wCurr = vec2(win[0], win[1]);
float bCurr = bin[0];
vec2 xCurr = vec2(xi[idx], xj[idx]);
float yCurr = y[idx];
float yHat = inference(xCurr, wCurr, bCurr);
float dZ = yHat - yCurr;
vec2 dW = (1. / m) * xCurr * dZ;
float dB = (1. / m) * dZ;
wouti[idx] = dW.x;
woutj[idx] = dW.y;
bout[idx] = dB;
lout[idx] = calculateLoss(yHat, yCurr);
}
)";
#endif //ANDROID_SIMPLE_KOMPUTEMODELML_HPP

View file

@ -9,7 +9,7 @@
tools:context="com.ethicalml.kompute.KomputeJni">
<LinearLayout
android:layout_width="409dp"
android:layout_width="wrap_content"
android:layout_height="wrap_content"
android:orientation="vertical"
app:layout_constraintBottom_toBottomOf="parent"
@ -67,7 +67,7 @@
android:layout_weight="1"
android:ems="10"
android:inputType="textPersonName"
android:text="[ 1, 2, 3 ]" />
android:text="[ 0, 1, 1, 1, 1, 1 ]" />
</LinearLayout>
<Space
@ -93,7 +93,7 @@
android:layout_weight="1"
android:ems="10"
android:inputType="textPersonName"
android:text="[ 1, 2, 3 ]" />
android:text="[ 0, 0, 0, 1, 1, 1 ]" />
</LinearLayout>
@ -120,7 +120,7 @@
android:layout_weight="1"
android:ems="10"
android:inputType="textPersonName"
android:text="[ 1, 2, 3 ]" />
android:text="[ 0, 0, 0, 1, 1, 1 ]" />
</LinearLayout>